Index A | B | C | D | E | F | G | H | I | L | M | N | P | R | S | T | V A addnoise() (in module MARBLE.dynamics) AnisoConv (class in MARBLE.layers) Arrow3D (class in MARBLE.plotting) B batch_loss() (MARBLE.main.net method) C check_parameters() (MARBLE.main.net method) cluster() (in module MARBLE.geometry) (in module MARBLE.postprocessing) compute_connection_laplacian() (in module MARBLE.geometry) compute_connections() (in module MARBLE.geometry) compute_distribution_distances() (in module MARBLE.geometry) compute_eigendecomposition() (in module MARBLE.geometry) compute_gauges() (in module MARBLE.geometry) compute_laplacian() (in module MARBLE.geometry) construct_dataset() (in module MARBLE.preprocessing) create_axis() (in module MARBLE.plotting) D detach_from_gpu() (in module MARBLE.utils) Diffusion (class in MARBLE.layers) distribution_distances() (in module MARBLE.postprocessing) do_3d_projection() (MARBLE.plotting.Arrow3D method) draw() (MARBLE.plotting.Arrow3D method) E e_id (MARBLE.utils.EdgeIndex attribute) edge_index (MARBLE.utils.EdgeIndex attribute) EdgeIndex (class in MARBLE.utils) embed() (in module MARBLE.geometry) embed_in_2D() (in module MARBLE.postprocessing) embed_parabola() (in module MARBLE.dynamics) embedding() (in module MARBLE.plotting) evaluate() (MARBLE.main.net method) expand_edge_index() (in module MARBLE.utils) expand_index() (in module MARBLE.utils) F fields() (in module MARBLE.plotting) fit() (MARBLE.main.net method) fit_graph() (in module MARBLE.geometry) forward() (MARBLE.layers.AnisoConv method) (MARBLE.layers.Diffusion method) (MARBLE.layers.InnerProductFeatures method) (MARBLE.main.loss_fun method) (MARBLE.main.net method) fun_vanderpol() (in module MARBLE.dynamics) furthest_point_sampling() (in module MARBLE.geometry) G get_limits() (in module MARBLE.plotting) global_to_local_frame() (in module MARBLE.geometry) gradient_op() (in module MARBLE.geometry) graph() (in module MARBLE.plotting) H histograms() (in module MARBLE.plotting) I initial_conditions() (in module MARBLE.dynamics) InnerProductFeatures (class in MARBLE.layers) is_connected() (in module MARBLE.geometry) L load_model() (MARBLE.main.net method) load_ODE() (in module MARBLE.dynamics) loaders() (in module MARBLE.dataloader) loss_fun (class in MARBLE.main) losses() (in module MARBLE.plotting) M manifold_dimension() (in module MARBLE.geometry) MARBLE.dataloader module MARBLE.dynamics module MARBLE.geometry module MARBLE.layers module MARBLE.main module MARBLE.plotting module MARBLE.postprocessing module MARBLE.preprocessing module MARBLE.utils module message_and_aggregate() (MARBLE.layers.AnisoConv method) module MARBLE.dataloader MARBLE.dynamics MARBLE.geometry MARBLE.layers MARBLE.main MARBLE.plotting MARBLE.postprocessing MARBLE.preprocessing MARBLE.utils move_to_gpu() (in module MARBLE.utils) N NeighborSampler (class in MARBLE.dataloader) neighbour_vectors() (in module MARBLE.geometry) neighbourhoods() (in module MARBLE.plotting) net (class in MARBLE.main) normalize_sparse_matrix() (in module MARBLE.geometry) np2torch() (in module MARBLE.utils) P parabola() (in module MARBLE.dynamics) parallel_proc() (in module MARBLE.utils) parse_parameters() (MARBLE.main.net method) plot_arrows() (in module MARBLE.plotting) print_settings() (in module MARBLE.utils) project_gauge_to_neighbours() (in module MARBLE.geometry) project_to_gauges() (in module MARBLE.geometry) R reject_outliers() (in module MARBLE.dynamics) relabel_by_proximity() (in module MARBLE.geometry) reset_parameters() (MARBLE.layers.InnerProductFeatures method) (MARBLE.main.net method) restrict_dimension() (in module MARBLE.utils) restrict_to_batch() (in module MARBLE.utils) run_training() (MARBLE.main.net method) S sample() (MARBLE.dataloader.NeighborSampler method) sample_2d() (in module MARBLE.dynamics) save_model() (MARBLE.main.net method) set() (MARBLE.plotting.Arrow3D method) set_axes() (in module MARBLE.plotting) set_colors() (in module MARBLE.plotting) setup_layers() (MARBLE.main.net method) simulate_ODE() (in module MARBLE.dynamics) simulate_trajectories() (in module MARBLE.dynamics) simulate_vanderpol() (in module MARBLE.dynamics) size (MARBLE.utils.EdgeIndex attribute) solve_ODE() (in module MARBLE.dynamics) standardize() (in module MARBLE.utils) T tile_tensor() (in module MARBLE.utils) to() (MARBLE.utils.EdgeIndex method) to_block_diag() (in module MARBLE.utils) to_list() (in module MARBLE.utils) to_pandas() (in module MARBLE.utils) to_SparseTensor() (in module MARBLE.utils) trajectories() (in module MARBLE.plotting) transform() (MARBLE.main.net method) V voronoi() (in module MARBLE.plotting)